From SlicerWiki

Overview

Slicer offers a variety of predefined lookup tables (LUT). Volumes can be associated with a LUT in the volumes module. Also, see the colors module.

LUTs

Discrete LUTs	Shade LUTs	Tint LUTs	Freesurfer LUTs     Freesurfer labels
PET LUTs	Cartilage MRI LUTs	Labelmap LUTs     2010 Brain Labels: Label colors for brain segmentation     2010 Label Colors: Colors for a generic labelmap	Generic Labelmap LUTs     GenericAnatomyColors: default LUT     GenericColors

Custom LUTs

• Mori-Atlas labels
• Lauras labels
• 2010 Brain Atlas:Good example of the wiki-based labelpage format, including multiple tables.

LUTs for Charting

Please see the separate page

LUTs in Slicer

You can review and edit LUTs in Slicer via the Colors module

Slicer ColorPicker

The slicer colorpicker allows to select colors from a label map and to assign them to objects such as surface models or streamlines

Custom LUTs

It is relatively easy to create custom LUTs by creating a table with the colors on the wiki. This allows to select specific names and colors when segmenting. See below for an example.

• Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
• Go here to create a text file in Slicer LUT format.
• A custom LUT can be loaded into Slicer like any other file.