Difference between revisions of "Modules:PythonExtractBaseline-Documentation-3.4"

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(New page: Return to Slicer 3.4 Documentation __NOTOC__ ===Module Name=== MyModule {| |thumb|280px|Caption 1 |[[Image:screenshotBlank.png|thumb|2...)
 
 
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[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
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[[Documentation-3.4|Return to Slicer 3.4 Documentation]]
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[[Announcements:Slicer3.4#Highlights|Gallery of New Features]]
 
__NOTOC__
 
__NOTOC__
 
===Module Name===
 
===Module Name===
MyModule
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Python Extract Baseline
 
 
 
{|
 
{|
|[[Image:screenshotBlank.png|thumb|280px|Caption 1]]
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|[[Image:ExtractBaseline.png|thumb|280px|Extract Baseline from DWI module]]
|[[Image:screenshotBlank.png|thumb|280px|Caption 2]]
 
|[[Image:screenshotBlank.png|thumb|280px|Caption 3]]
 
 
|}
 
|}
 
 
== General Information ==
 
== General Information ==
 
===Module Type & Category===
 
===Module Type & Category===
  
Type: Interactive or CLI
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Type: Interactive
  
Category: Base or (Filtering, Registration, ''etc.'')
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Category: Base
  
 
===Authors, Collaborators & Contact===
 
===Authors, Collaborators & Contact===
* Author1: Affiliation & logo, if desired
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* Author: Julien von Siebenthal
* Contributor1: Affiliation & logo, if desired
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* Contact: jvs at bwh.harvard.edu
* Contributor2: Affiliation & logo, if desired
 
* Contact: name, email
 
  
 
===Module Description===
 
===Module Description===
Overview of what the module does goes here.
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The module extract the first available baseline from a DWI volume and load it as a scalar volume into the MRML tree.
  
 
== Usage ==
 
== Usage ==
  
 
===Examples, Use Cases & Tutorials===
 
===Examples, Use Cases & Tutorials===
 
* Note use cases for which this module is especially appropriate, and/or link to examples.
 
* Link to examples of the module's use
 
* Link to any existing tutorials
 
  
 
===Quick Tour of Features and Use===
 
===Quick Tour of Features and Use===
List all the panels in your interface, their features, what they mean, and how to use them. For instance:
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It is very easy to use it. Just select a DWI and then click apply. A scalar volume is generated and loaded into the MRML tree with the baseline information.
  
* '''Input panel:'''
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* '''Input DWI Volume:''' set the DWI volume
* '''Parameters panel:'''
 
* '''Output panel:'''
 
* '''Viewing panel:'''
 
  
 
== Development ==
 
== Development ==
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===Dependencies===
 
===Dependencies===
  
Other modules or packages that are required for this module's use.
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Volumes. Needed to load DWI volumes
  
 
===Known bugs===
 
===Known bugs===
  
 
Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.  
 
Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.  
 
  
  
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===Source code & documentation===
 
===Source code & documentation===
 
Customize following [http://viewvc.slicer.org/viewcvs.cgi/ links] for your module.
 
 
[http://www.na-mic.org/Slicer/Documentation/Slicer3/html/ Links] to documentation generated by doxygen.
 
 
  
 
== More Information ==  
 
== More Information ==  
  
 
===Acknowledgment===
 
===Acknowledgment===
Include funding and other support here.
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National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149 (to Ron Kikinis, Marek Kubicki).
  
 
===References===
 
===References===
Publications related to this module go here. Links to pdfs would be useful.
 

Latest revision as of 20:33, 17 February 2010

Home < Modules:PythonExtractBaseline-Documentation-3.4

Return to Slicer 3.4 Documentation

Gallery of New Features

Module Name

Python Extract Baseline

Extract Baseline from DWI module

General Information

Module Type & Category

Type: Interactive

Category: Base

Authors, Collaborators & Contact

  • Author: Julien von Siebenthal
  • Contact: jvs at bwh.harvard.edu

Module Description

The module extract the first available baseline from a DWI volume and load it as a scalar volume into the MRML tree.

Usage

Examples, Use Cases & Tutorials

Quick Tour of Features and Use

It is very easy to use it. Just select a DWI and then click apply. A scalar volume is generated and loaded into the MRML tree with the baseline information.

  • Input DWI Volume: set the DWI volume

Development

Dependencies

Volumes. Needed to load DWI volumes

Known bugs

Follow this link to the Slicer3 bug tracker.


Usability issues

Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.

Source code & documentation

More Information

Acknowledgment

National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149 (to Ron Kikinis, Marek Kubicki).

References